MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
8_33DSS_C5_S8
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 484
bases: 5,219,070 bps
CDS: 4,342
rRNA: 5
Repeat region:
tmRNA: 1
tRNA: 67
misc RNA:
Total features: 4,415
Total number of protein coding genes annotated/found:
4,342
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5047|JADGLP010000480.1
SEQF5047_04415
Genome Viewer
NA
AA
702/234
7749-8450
hypothetical protein
SEQF5047|JADGLP010000480.1
SEQF5047_04414
Genome Viewer
NA
AA
294/98
7398-7691
hypothetical protein
SEQF5047|JADGLP010000480.1
SEQF5047_04413
Genome Viewer
NA
AA
294/98
7167-6874
hypothetical protein
SEQF5047|JADGLP010000480.1
SEQF5047_04411
Genome Viewer
NA
AA
1638/546
6366-4729
hypothetical protein
SEQF5047|JADGLP010000480.1
SEQF5047_04410
Genome Viewer
NA
AA
807/269
3838-4644
hypothetical protein
SEQF5047|JADGLP010000480.1
SEQF5047_04409
Genome Viewer
NA
AA
369/123
3456-3824
hypothetical protein
SEQF5047|JADGLP010000480.1
SEQF5047_04408
Genome Viewer
NA
AA
831/277
2615-3445
hypothetical protein
SEQF5047|JADGLP010000480.1
SEQF5047_04407
Genome Viewer
NA
AA
846/282
1763-2608
Cobalt import ATP-binding protein CbiO
SEQF5047|JADGLP010000480.1
SEQF5047_04406
Genome Viewer
NA
AA
789/263
787-1575
hypothetical protein
SEQF5047|JADGLP010000480.1
SEQF5047_04405
Genome Viewer
NA
AA
213/71
582-794
hypothetical protein
SEQF5047|JADGLP010000477.1
SEQF5047_04403
Genome Viewer
NA
AA
1380/460
31231-32610
Transcriptional regulatory protein ZraR
SEQF5047|JADGLP010000477.1
SEQF5047_04402
Genome Viewer
NA
AA
840/280
31143-30304
Putative peptidyl-prolyl cis-trans isomerase
SEQF5047|JADGLP010000477.1
SEQF5047_04401
Genome Viewer
NA
AA
1236/412
30298-29063
putative zinc protease
SEQF5047|JADGLP010000477.1
SEQF5047_04400
Genome Viewer
NA
AA
1359/453
29012-27654
Multidrug resistance protein NorM
SEQF5047|JADGLP010000477.1
SEQF5047_04399
Genome Viewer
NA
AA
2319/773
27632-25314
Sensor histidine kinase RcsC
SEQF5047|JADGLP010000477.1
SEQF5047_04398
Genome Viewer
NA
AA
4443/1481
25129-20687
hypothetical protein
SEQF5047|JADGLP010000477.1
SEQF5047_04397
Genome Viewer
NA
AA
2340/780
20655-18316
Outer membrane protein assembly factor BamA
SEQF5047|JADGLP010000477.1
SEQF5047_04396
Genome Viewer
NA
AA
912/304
18218-17307
hypothetical protein
SEQF5047|JADGLP010000477.1
SEQF5047_04395
Genome Viewer
NA
AA
1956/652
17165-15210
putative ABC transporter ATP-binding protein YheS
SEQF5047|JADGLP010000477.1
SEQF5047_04394
Genome Viewer
NA
AA
2037/679
15162-13126
Neutral endopeptidase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Page last updated: July 7, 2021 08:39:35
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